MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Ligilactobacillus murinus
19428wF2_HT12
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 193
bases: 2,276,358 bps
CDS: 2,234
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 61
misc RNA:
Total features: 2,305
Total number of protein coding genes annotated/found:
2,234
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Items 1 - 20
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5023|JADGME010000011.1
SEQF5023_00058
Genome Viewer
NA
AA
1401/467
1770-370
Bifunctional protein GlmU
SEQF5023|JADGME010000011.1
SEQF5023_00059
Genome Viewer
NA
AA
834/278
2754-1921
Pur operon repressor
SEQF5023|JADGME010000011.1
SEQF5023_00060
Genome Viewer
NA
AA
1215/405
3126-4340
Argininosuccinate synthase
SEQF5023|JADGME010000011.1
SEQF5023_00061
Genome Viewer
NA
AA
1386/462
4333-5718
Argininosuccinate lyase
SEQF5023|JADGME010000011.1
SEQF5023_00062
Genome Viewer
NA
AA
1134/378
5827-6960
Glycerate 3-kinase
SEQF5023|JADGME010000011.1
SEQF5023_00063
Genome Viewer
NA
AA
876/292
7038-7913
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
SEQF5023|JADGME010000011.1
SEQF5023_00064
Genome Viewer
NA
AA
864/288
8833-7970
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00065
Genome Viewer
NA
AA
1020/340
10031-9012
Lipoate-protein ligase LplJ
SEQF5023|JADGME010000011.1
SEQF5023_00066
Genome Viewer
NA
AA
1407/469
11462-10056
Dihydrolipoyl dehydrogenase
SEQF5023|JADGME010000011.1
SEQF5023_00067
Genome Viewer
NA
AA
1287/429
12754-11468
Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex
SEQF5023|JADGME010000011.1
SEQF5023_00068
Genome Viewer
NA
AA
342/114
13111-12770
Pyruvate dehydrogenase E1 component subunit beta
SEQF5023|JADGME010000011.1
SEQF5023_00069
Genome Viewer
NA
AA
549/183
13747-13199
Pyruvate dehydrogenase E1 component subunit beta
SEQF5023|JADGME010000011.1
SEQF5023_00070
Genome Viewer
NA
AA
1101/367
14847-13747
Pyruvate dehydrogenase E1 component subunit alpha
SEQF5023|JADGME010000011.1
SEQF5023_00071
Genome Viewer
NA
AA
120/40
15196-15315
hypothetical protein
SEQF5023|JADGME010000011.1
SEQF5023_00072
Genome Viewer
NA
AA
1359/453
15387-16745
Riboflavin transporter RibZ
SEQF5023|JADGME010000011.1
SEQF5023_00073
Genome Viewer
NA
AA
234/78
17088-16855
Protein Veg
SEQF5023|JADGME010000011.1
SEQF5023_00074
Genome Viewer
NA
AA
897/299
18077-17181
Ribosomal RNA small subunit methyltransferase A
SEQF5023|JADGME010000011.1
SEQF5023_00075
Genome Viewer
NA
AA
582/194
18651-18070
Ribonuclease M5
SEQF5023|JADGME010000011.1
SEQF5023_00076
Genome Viewer
NA
AA
768/256
19415-18648
putative metal-dependent hydrolase YcfH
SEQF5023|JADGME010000011.1
SEQF5023_00077
Genome Viewer
NA
AA
2031/677
21505-19475
Methionine--tRNA ligase
Items 1 - 20
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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